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Human-yeast snoRNAs
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Perform a Blastn search against the SnoRNABase
Paste your sequence in FASTA (or plain text) format :
Or load it from disk
Advanced options under this separator
Alignement view option :
pairwise
query-anchored showing identities
query-anchored no identities
flat query-anchored, show identities
flat query-anchored, no identities
XML Blast output
tabular
tabular with comment lines
Comma-separated values
Gap open :
Existence: 5 Extension: 2
Existence: 2 Extension: 2
Existence: 1 Extension: 2
Existence: 0 Extension: 2
Existence: 2 Extension: 1
Existence: 1 Extension: 1
Match/Mismatch Scores :
Reward: 1 penalty: -2
Reward: 1 penalty: -3
Reward: 1 penalty: -4
Reward: 2 penalty: -3
expectation value (E):
word size:
Number of one-line descriptions (V):
Number of alignement to show (B):
Filter query sequence:
Effective length of search space:
(Use zero for the real size)
Perform ungapped alignement :
False (default)
True
Last update: August 25 2016 16:20:59.
