|
| Human-yeast snoRNA correspondence |
|---|
| Homo sapiens | S. cerevisiae | ||||||
|---|---|---|---|---|---|---|---|
| snoRNA | target | position | modif | snoRNA | target | position | modif |
| U3 | PR | U3 | PR | ||||
| U17 | PR | snR30 | PR | ||||
| U27 | SSU | A27 | M | snR74 | SSU | A28 | M |
| U57 | SSU | A99 | M | snR51 | SSU | A100 | M |
| ACA36 ACA36B ACA50 ACA62 | SSU | U105 | PU | snR44 | SSU | U106 | PU |
| U66 | SSU | U119 | PU | snR49 | SSU | U120 | PU |
| U14A U14B | SSU | C462 | M | U14 | SSU | C414 | M, PR |
| unknown | SSU | A468 | M | snR52 | SSU | A420 | M |
| U16 | SSU | A484 | M | snR87 | SSU | A436 | M |
| U62A U62B | SSU | A590 | M | snR41 | SSU | A541 | M |
| HBII-135 | SSU | U627 | M | snR77 | SSU | U578 | M |
| U36A U36B | SSU | A668 | M | snR47 | SSU | A619 | M |
| unknown | SSU | U681 [1] | PU | snR161 | SSU | U632 | PU |
| ACA28 | SSU | U815 | PU | snR80 | SSU | U759 | PU |
| ACA44 | SSU | U822 | PU | snR161 | SSU | U766 | PU |
| U59A U59B | SSU | A1031 | M | snR54 | SSU | A974 | M |
| ACA8 | SSU | U1056 | PU | snR31 | SSU | U999 | PU |
| ACA5 ACA5b ACA5c | SSU | U1238 | PU | snR85 | SSU | U1181 | PU |
| ACA36 ACA36B | SSU | U1244 | PU | snR36 | SSU | U1187 | PU |
| ACA13 | SSU | U1248 | PU | snR35 | SSU | U1191 | PU |
| U33 | SSU | U1326 | M | snR55 | SSU | U1269 | M |
| U232A | SSU | G1328 | M | snR40 | SSU | G1271 | M |
| ACA4 | SSU | U1347 | PU | snR83/RUF3 | SSU | U1290 | PU |
| U25 | SSU | G1490 | M | snR56 | SSU | G1428 | M |
| U43 | SSU | C1703 | M | snR70 | SSU | C1639 | M |
| U18A U18B U18C | LSU | A1313 | M | U18 | LSU | A649 | M |
| U104 | LSU | C1327 | M | snR58 | LSU | C663 | M |
| snR39B | LSU | G1509 | M | snR39b | LSU | G805 | M |
| U32A U32B U51 | LSU | A1511 | M | snR39 snR59 | LSU | A807 | M |
| U77 U80 | LSU | A1521 | M | snR60 | LSU | A817 | |
| U80 | LSU | G1612 | M | snR60 | LSU | G908 | M |
| ACA56 | LSU | U1664 | PU | snR8 | LSU | U960 | PU |
| ACA9 | LSU | U1670 | PU | snR43 | LSU | U966 | PU |
| ACA52 | LSU | U1731 | PU | snR5 | LSU | U1004 | PU |
| ACA9 | LSU | U1769 | PU | snR33 | LSU | U1042 | PU |
| ACA7 ACA7B | LSU | U1779 | PU | snR81 | LSU | U1052 | PU |
| Unknown | LSU | U1847 | PU | snR5 | LSU | U1124 | PU |
| U38A U38B | LSU | A1858 | M | snR61 | LSU | A1133 | M |
| U24 | LSU | C2338 | M | U24 | LSU | C1437 | M |
| U76 | LSU | A2350 | M | U24 | LSU | A1449 | M |
| U24 | LSU | G2351? (slide?) C2352 | M | U24 | LSU | G1450 (slide) | M |
| U34 | LSU | U2824 | M | snR62 | LSU | U1888 | M |
| ACA6 | LSU | U3616 | PU | snR3 | LSU | U2133 | PU |
| Unknown | LSU | U3674 | PU | snR32 | LSU | U2191 | PU |
| HBII-180A HBII-180B HBII-180C | LSU | C3680 | M | snR76 | LSU | C2197 | M |
| U36C | LSU | A3703 | M | snR47 | LSU | A2220 | M |
| U46 | LSU | A3739 | M | snR63 | LSU | A2256 | M |
| U19 U19-2 | LSU | U3741 | PU | snR191 | LSU | U2258 | PU |
| U19 U19-2 | LSU | U3743 | PU | snR191 | LSU | U2260 | PU |
| Unknown | LSU | U3747 | PU | snR3 | LSU | U2264 | PU |
| Unknown | LSU | U3749 | PU | snR84 | LSU | U2266 | PU |
| U15A U15B | LSU | A3764 | M | snR13 | LSU | A2280 A2281(slide) | M |
| ACA48 HBI-43 | LSU | U3797 | PU M | snR86 | LSU | U2314 | PU |
| U74 | LSU | C3820 | M | snR64 | LSU | C2337 | M |
| ACA58 | LSU | U3823 | PU | snR9 | LSU | U2340 | PU |
| E2 | LSU | U3830 | PU | snR65 | LSU | U2347 | M |
| E2 ACA8 | LSU | U3832 | PU | snR82 | LSU | U2349 | PU |
| HBII-99 | LSU | G3878 | M | snR190 | LSU | G2395 [2] | M |
| ACA3 | LSU | U3899 | PU | snR11 | LSU | U2416 | PU |
| U52 | LSU | U3904 | M | snR78 | LSU | U2421 | M |
| U31 | LSU | G4166 | M | snR67 | LSU | G2619 | M |
| U41 | LSU | U4276 | M | snR51 | LSU | U2729 | M |
| ACA2a ACA2b ACA34 | LSU | U4282 | PU | snR189 | LSU | U2735 | PU |
| U60 | LSU | G4340 | M | snR48 | LSU | G2793 | M |
| snR38A snR38B snR38C | LSU | G4362 | M | snR38 | LSU | G2815 | M |
| U65 | LSU | U4373 | PU | snR34 | LSU | U2826 | PU |
| ACA16 | LSU | U4412 | PU | snR46 | LSU | U2865 | PU |
| U65 | LSU | U4427 | PU | snR34 | LSU | U2880 | PU |
| unknown | LSU | U4468 | M | snR52 | LSU | U2921 | M |
| unknown | LSU | G4469 | M | Spb1p | LSU | G2922 | M |
| ACA21 | LSU | U4470 | PU | snR10 | LSU | U2923 | PU, PR |
| ACA10 | LSU | U4491 | PU | snR37 | LSU | U2944 | PU |
| U29 | LSU | A4493 | M | snR71 | LSU | A2946 | M |
| U35A U35B | LSU | C4506 | M | snR73 | LSU | C2959 | M |
| ACA27 HBI-6 | LSU | U4522 | PU | snR42 | LSU | U2975 | PU |
| U69 [3] | 5.8S | U69 | PU | Pus7p | 5S | U50 | PU |
Last update:
August 07 2023 18:06:48. |
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1: placed by matching the oligonucleotide in which the modification was found with the rat gene sequence (see BEH Maden and JA Wakeman, Biochem J (1988) 249:459-464)
2: predicted target site
3: tentative correspondence