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HUGO Gene Nomenclature Committee
HGNC Approved SymbolHGNC Approved Name
SCARNA3small Cajal body-specific RNA 3
snoid : SR0000036
Length : 144
Abstract : Homo sapiens H/ACA box snoRNA HBI-100. This snoRNA is a human paralogue of the mouse MBI-100 snoRNA cloned by Hüttenhofer et al. (2001). It is predicted to guide the pseudouridylation of U6 snRNA U40. From human to opossum and chicken, HBI-100 is localized in the RFWD2 gene. A rodent-specific type 2 snoRT, HBI-100B, resides in the Wdr22 gene in mouse (MBI-100) and rat. In lizard, the most likely snoRNA ortholog resides in the ALG8 gene. In Xenopus, four HBI-100-like copies reside in the hypothetical protein LOC496549 (DDX1) gene.
GenBank accession number :
Host gene : RFWD2 (ubiquitin ligase protein COP1).
Click here to see the position on the UCSC Genome Browser
Target RNA : U6 snRNA U40
sno/scaRNAs with same target U6 snRNA U40 : ACA12   
References :
- Huttenhofer, A., Kiefmann, M., Meier-Ewert, S., O'Brien, J., Lehrach, H., Bachellerie, J. P., and Brosius, J. (2001). RNomics: an experimental approach that identifies 201 candidates for novel, small, non-messenger RNAs in mouse. Embo J 20, 2943-2953.
Sequence :
Phylogenic conservation: Alignment - Fasta file
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