ACA67B |
 |
HUGO Gene Nomenclature Committee | HGNC Approved Symbol | HGNC Approved Name | SNORA80B | small nucleolar RNA, H/ACA box 80B |
|
 | snoid :
SR0000467
|
 | Length :
136 |
 | Abstract :
Homo sapiens ACA67B H/ACA box snoRNA. This snoRNA is the most likely parental copy of snoRT ACA67 (Weber,2006; Luo and Li, 2007). A second primate-specific Type 1 ACA67B snoRT resides in the JTV1 gene (chr7:6,023,034-6,023,168). A third one (extragenic, chr16:30,338,447-30,338,581) is embedded in a complex array of Alu elements. ACA42 might be an old ACA67B snoRT. A rodent-specific snoRT resides in the RPL6 gene, and a cow-specific one in the EIF2A gene.
In opossum, platypus, lizard and Xenopus tropicalis, the closest paralog of ACA67B (ACA67E) resides in the SSR4 gene. |
 |
 | GenBank accession number :
|
 | Host gene : ODC1 (ornithine decarboxylase 1) |
 | Click here to see the position on the UCSC Genome Browser |
 | Target RNA : 18S rRNA U109 and 18S rRNA U572 |
 | sno/scaRNAs with same target 18S rRNA U109 : ACA42  ACA67   |
 | sno/scaRNAs with same target 18S rRNA U572 : ACA42  ACA67   |
 | References : - Luo Y. and Li S. (2007) Genome-wide analyses of retrogenes derived from the human box H/ACA snoRNAs. Nuc. Acids Res. 35(2):559-71. - Weber MJ. (2006) Mammalian Small Nucleolar RNAs Are Mobile Genetic Elements. PLoS Genet. 2(12):e205
|
 | Sequence :
|
snoRNABase - http://www-snorna.biotoul.fr/ |