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HBII-82
HUGO Gene Nomenclature Committee
HGNC Approved SymbolHGNC Approved Name
SNORD111small nucleolar RNA, C/D box 111
snoid : SR0000223
Length : 94
Abstract : Homo sapiens C/D box snoRNA HBII-82. This snoRNA is the human orthologue of the mouse MBII-82 described by Hüttenhofer et al. (2001). It is predicted to guide the 2'O-ribose methylation of 28S rRNA G3923. In tetraopods and zebrafish, HBII-82 and its paralog HBII-82B are located in the SF3B3 gene (4 copies in zebrafish). In fugu, medaka, stickleback and tetraodon, 2 or 3 copies are localized in the LARP1 (la related protein isoform 1)gene. In ciona intestinalis, three copies of a possible ortholog are located in the RPL10 gene. See HBII-82B file for sequences in Xenopus, fishes and ciona.
GenBank accession number :
Host gene : SF3B3 (Splicing factor 3b, subunit 3, 130kD)
Click here to see the position on the UCSC Genome Browser
Target RNA : 28S rRNA G3923
sno/scaRNAs with same target 28S rRNA G3923 : HBII-82B   
References :
- Huttenhofer, A., Kiefmann, M., Meier-Ewert, S., O'Brien, J., Lehrach, H., Bachellerie, J. P., and Brosius, J. (2001). RNomics: an experimental approach that identifies 201 candidates for novel, small, non-messenger RNAs in mouse. Embo J 20, 2943-2953.
Sequence :
Phylogenic conservation: Alignment - Fasta file
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