hTR
HUGO Gene Nomenclature Committee HGNC Approved Symbol HGNC Approved Name TERC telomerase RNA component
snoid :
SR0000311
Length :
548
Abstract :
Homo sapiens telomerase RNA (hTR).
Human telomerase RNA was cloned by Feng et al. (1995). By in vitro and in vivo mapping experiments, Antal et al. (2002) showed that its 3' terminal domain folds into to a box H/ACA snoRNA-like "hairpin-hinge-hairpin-tail" structure, as previously predicted by Mitchell, Cheng and Collins (1999) and Chen, Blasco and Greider (2000). In agreement, RNP proteins associated with box H/ACA snoRNAs, including the pseudouridine synthase dyskerin, are also integral components of the human telomerase RNP (Mitchell, Wood and Collins, 1999; Filipowicz and Pogacic, 2002). The H/ACA domain of hTR is essential for both in vivo function and accumulation of telomerase (Fu and Collins, 2003). The autosomal dominant form of dyskeratosis congenita, an inherited skin and bone marrow failure syndrome, is due to mutations in hTR gene (Vulliamy et al. ,2001).
FISH experiments showed that hTR accumulates in Cajal bodies of cancer cells. Accordingly, the conserved CR7 region in the second hairpin of the H/ACA domain of hTR contains a Cajal body-specific localization signal previously recognized in small Cajal body-specific RNAs (scaRNAs) (Richard et al. 2003). The NMR structure of the CR7/CAB box was determined by Theimer et al. (2007).
GenBank accession number :
AF221907
Host gene : Independent transcriptional unit
Click here to see the position on the UCSC Genome Browser
Target RNA : Unknown
sno/scaRNAs with same target Unknown : HBI-36  ACA11  ACA18  ACA29  ACA38  ACA39  ACA49  ACA51  ACA53  ACA59  U17a  U17b  HBII-436  HBII-437  HBII-438A  HBII-438B  HBII-13  14q(0)  14q(I-1)  14q(I-2)  14q(I-3)  14q(I-4)  14q(I-5)  14q(I-6)  14q(I-7)  14q(I-8)  14q(I-9)  14q(II-1)  14q(II-2)  14q(II-3)  14q(II-4)  14q(II-5)  14q(II-6)  14q(II-7)  14q(II-8)  14q(II-9)  14q(II-10)  14q(II-11)  14q(II-12)  14q(II-13)  14q(II-14)  14q(II-15)  14q(II-16)  14q(II-17)  14q(II-18)  14q(II-19)  14q(II-20)  14q(II-21)  14q(II-22)  14q(II-23)  14q(II-24)  14q(II-25)  14q(II-26)  14q(II-27)  14q(II-28)  14q(II-29)  14q(II-30)  14q(II-31)  HBII-52-32  HBII-52-20  HBII-52-19  HBII-52-18  HBII-52-17  HBII-52-2  HBII-52-3  HBII-52-7  HBII-52-25  HBII-52-23  HBII-85-27  HBII-85-26  HBII-85-24  HBII-85-23  HBII-85-22  HBII-85-21  HBII-85-20  HBII-85-19  HBII-85-1  HBII-85-2  HBII-85-3  HBII-85-4  HBII-85-5  HBII-85-6  HBII-85-7  HBII-85-8  HBII-85-9  HBII-85-10  HBII-85-11  HBII-85-12  HBII-85-13  HBII-85-14  HBII-85-15  HBII-85-16  HBII-85-17  HBII-85-18  U97  U98b  U101  U106  HBII-85-25  HBII-115  HBII-289  HBII-295  U50B  U3  U8  U13  U22  U3-2  U3-3  U3-4  U83  U84  U83A  U83B  U86  U73a  U73b  U3-2B  U108  U107  ACA59B  HBII-52-37  HBII-52-48  HBII-85-28  HBII-85-29  SNORA11B  SNORA11C  SNORA11D  SNORA11E  SNORA38B  SNORA84  SNORD126  SNORD125  SNORD124  SNORD123  
References : - Richard, P., Darzacq, X., Bertrand, E., Jady, B. E., Verheggen, C., and Kiss, T. (2003). A common sequence motif determines the Cajal body-specific localization of box H/ACA scaRNAs. Embo J, 22, 4283-4293. - Chen, J. L., Blasco, M. A., and Greider, C. W. (2000). Secondary structure of vertebrate telomerase RNA. Cell, 100, 503-514. - Antal, M., Boros, E., Solymosy, F., and Kiss, T. (2002). Analysis of the structure of human telomerase RNA in vivo. Nucleic Acids Res, 30, 912-920. - Mitchell, J. R., Cheng, J., and Collins, K. (1999). A box H/ACA small nucleolar RNA-like domain at the human telomerase RNA 3' end. Mol Cell Biol, 19, 567-576. - Fu, D., and Collins, K. (2003). Distinct biogenesis pathways for human telomerase RNA and H/ACA small nucleolar RNAs. Mol Cell, 11, 1361-1372. - Mitchell, J. R., Wood, E., and Collins, K. (1999). A telomerase component is defective in the human disease dyskeratosis congenita. Nature, 402, 551-555 - Filipowicz, W., and Pogacic, V. (2002). Biogenesis of small nucleolar ribonucleoproteins. Curr Opin Cell Biol, 14, 319-327 - Vulliamy, T., Marrone, A., Goldman, F., Dearlove, A., Bessler, M., Mason, P. J., and Dokal, I. (2001). The RNA component of telomerase is mutated in autosomal dominant dyskeratosis congenita. Nature, 413, 432-435 - Feng, J., Funk, W. D., Wang, S. S., Weinrich, S. L., Avilion, A. A., Chiu, C. P., Adams, R. R., Chang, E., Allsopp, R. C., Yu, J., and et al. (1995). The RNA component of human telomerase. Science, 269, 1236-1241. - Theimer, C. A., Jady, B. E., Chim, N., Richard, P., Breece, K. E., Kiss, T., and Feigon, J. (2007). Structural and functional characterization of human telomerase RNA processing and cajal body localization signals. Mol Cell 27, 869-881
Sequence :
Phylogenic conservation: Alignment - Fasta file
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